Publications de l'équipe EPIE
2017
- HASSEL C, MIRAND A, FARKAS A, DIEDRICH S, HUEMER HP, PEIGUE-LAFEUILLE H, ARCHIMBAUD C, HENQUELL C, BAILLY JL ; HFMD FRENCH STUDY NETWORK. Phylogeography of Coxsackievirus A16 Reveals Global Transmission Pathways and Recent Emergence and Spread of a Recombinant Genogroup. J Virol. 2017. 91(18). pii : e00630-17. doi : 10.1128/JVI.00630-17.
- RAO DC, NAIDU JR, MAIYA PP, BABU A, BAILLY JL. Large-scale HFMD epidemics caused by Coxsackievirus A16 in Bangalore, India during 2013 and 2015. Infect Genet Evol. 2017. 55:228-235. doi : 10.1016/j.meegid.2017.08.030.
- MIRAND A, PEIGUE-LAFEUILLE H. [Clinical characteristics and course of hand, foot, and mouth disease]. Arch Pediatr. 2017. 24(10):1036-1046. doi : 10.1016/j.arcped.2017.08.001. French.
- EL HOUMAMI N, COINTAT V, MIRAND A, FOUILLOUX V, BZDRENGA J, BAKOUR S, MINODIER P, DUBOIS MA, ANAVE-FRAPECH F, CHARREL R, RAOULT D, FOURNIER PE. An Outbreak of Kingella Kingae Infections Complicating a Severe Hand, Foot, And Mouth Disease Outbreak in Nice, France, 2016. Pediatr Infect Dis J. 2017. 36(5):530-532. doi : 10.1097/INF.0000000000001487.
- DEBRAY A, OLLIER V, COUTARD A, ARDITTY F, BEKKAR S, BODEMER C, LERUEZ-VILLE M, MIRAND A, LESAGE F, FOUCAUD P. [Acute hemorrhagic edema of infancy associated with Coxsackie virus infection]. Arch Pediatr. 2017. 24(12):1262-1266. doi : 10.1016/j.arcped.2017.09.013. French.
- CORVEST V, ARCHIMBAUD C, L’HONNEUR AS, HENQUELL C, PEIGUE-LAFEUILLE H, DECOBERT M, MIRAND A. [Fatal case of enterovirus A71 hand, foot, and mouth disease infection]. Arch Pediatr. 2017. 24(12):1253-1258. doi : 10.1016/j.arcped.2017.09.010. French.
- ENGELMANN I, FATOUX M, LAZREK M, ALIDJINOU EK, MIRAND A, HENQUELL C, DEWILDE A, HOBER D. Enterovirus D68 detection in respiratory specimens : Association with severe disease. J Med Virol. 2017. 89(7):1201-1207. doi : 10.1002/jmv.24772.
- LE GUILLOU-GUILLEMETTE H, PIVERT A, BOUTHRY E, HENQUELL C, PETSARIS O, DUCANCELLE A, VEILLON P, VALLET S, ALAIN S, THIBAULT V, ABRAVANEL F, ROSENBERG AA, ANDRÉ-GARNIER E, BOUR JB, BAAZIA Y, TRIMOULET P, ANDRÉ P, GAUDY-GRAFFIN C, BETTINGER D, LARRAT S, SIGNORI-SCHMUCK A, SAOUDIN H, POZZETTO B, LAGATHU G, MINJOLLE-CHA S, STOLL-KELLER F, PAWLOTSKY JM, IZOPET J, PAYAN C, LUNEL-FABIANI F, LEMAIRE C. Natural non-homologous recombination led to the emergence of a duplicated V3-NS5A region in HCV-1b strains associated with hepatocellular carcinoma. PLoS One. 2017. 12(4):e0174651. doi : 10.1371/journal.pone.0174651.
- SOULIE C, GRUDÉ M, DESCAMPS D, AMIEL C, MORAND-JOUBERT L, RAYMOND S, PALLIER C, BELLECAVE P, REIGADAS S, TRABAUD MA, DELAUGERRE C, MONTES B, BARIN F, FERRÉ V, JEULIN H, ALLOUI C, YERLY S, SIGNORI-SCHMUCK A, GUIGON A, FAFI-KREMER S, HAÏM-BOUKOBZA S, MIRAND A, MAILLARD A, VALLET S, ROUSSEL C, ASSOUMOU L, CALVEZ V, FLANDRE P, MARCELIN AG ; ANRS AC11 RESISTANCE STUDY GROUP. Antiretroviral-treated HIV-1 patients can harbour resistant viruses in CSF despite an undetectable viral load in plasma. J Antimicrob Chemother. 2017. 72(8):2351-2354. doi : 10.1093/jac/dkx128.
- ASSOUMOU L, CHARPENTIER C, RECORDON-PINSON P, GRUDÉ M, PALLIER C, MORAND-JOUBERT L, FAFI-KREMER S, KRIVINE A, MONTES B, FERRÉ V, BOUVIER-ALIAS M, PLANTIER JC, IZOPET J, TRABAUD MA, YERLY S, DUFAYARD J, ALLOUI C, COURDAVAULT L, LE GUILLOU-GUILLEMETTE H, MAILLARD A, AMIEL C, VABRET A, ROUSSEL C, VALLET S, GUINARD J, MIRAND A, BEBY-DEFAUX A, BARIN F, ALLARDET-SERVENT A, AIT-NAMANE R, WIRDEN M, DELAUGERRE C, CALVEZ V, CHAIX ML, DESCAMPS D, REIGADAS S ; ANRS AC-11 RESISTANCE STUDY GROUP. Prevalence of HIV-1 drug resistance in treated patients with viral load >50 copies/mL : a 2014 French nationwide study. J Antimicrob Chemother. 2017. 72(6):1769-1773. doi : 10.1093/jac/dkx042.
2016
- ANTONA D, KOSSOROTOFF M, SCHUFFENECKER I, MIRAND A, LERUEZ-VILLE M, BASSI C, AUBART M, MOULIN F, LÉVY-BRUHL D, HENQUELL C, LINA B, DESGUERRE I. Severe paediatric conditions linked with EV-A71 and EV-D68, France, May to October 2016. Euro Surveill. 2016. 21(46). pii : 30402. doi : 10.2807/1560-7917.ES.2016.21.46.30402. PubMed PMID : 27918268.
- LAFOLIE J, MIRAND A, SALMONA M, LAUTRETTE A, ARCHIMBAUD C, BREBION A, REGAGNON C, CHAMBON M, MERCIER-DELARUE S, LE GOFF J, HENQUELL C. Severe Pneumonia Associated with Adenovirus Type 55 Infection, France, 2014. Emerg Infect Dis. 2016. 22(11):2012-2014. doi : 10.3201/eid2211.160728. PubMed PMID : 27767916 ; PubMed Central PMCID : PMC5088017.
- MIRAND A, LE SAGE FV, PEREIRA B, COHEN R, LEVY C, ARCHIMBAUD C, PEIGUE-LAFEUILLE H, BAILLY JL, HENQUELL C. Ambulatory Pediatric Surveillance of Hand, Foot and Mouth Disease as Signal of an Outbreak of Coxsackievirus A6 Infections, France, 2014-2015. Emerg Infect Dis. 2016. 22(11):1884-1893. doi : 10.3201/eid2211.160590. PubMed PMID : 27767012 ; PubMed Central PMCID : PMC5088007.
- LHERMET A, LACOMBE Z, BAUD O, HENQUELL C, BEYTOUT J, LESENS O. [Épidémie de varicelle chez des migrants Soudanais en provenance de Calais]. Med Mal Infect. 2016. 46(4 Suppl 1):135. doi : 10.1016/S0399-077X(16)30590-X. French. PubMed PMID : 27495728.
- ENGELMANN I, FATOUX M, LAZREK M, ALIDJINOU E, MIRAND A, HENQUELL C, DEWILDE A, HOBER D. [Détection de l’entérovirus d68 dans le tractus respiratoire en 2014]. Med Mal Infect. 2016. 46(4 Suppl 1):97. doi : 10.1016/S0399-077X(16)30495-4. French. PubMed PMID : 27495631.
- LAURICHESSE G, CASANOVA S, CORBIN V, MIRAND A, HENQUELL C, LESENS O, JACOMET C, BEYTOUT J, LAURICHESSE H. [Nouveaux antiviraux oraux contre le virus de l’hépatite C chez des patients co-infectés VIH-VHC : remarquables résultats des combinaisons orales sans interféron, 2014-2015]. Med Mal Infect. 2016. 46(4 Suppl 1):52. doi : 10.1016/S0399-077X(16)30383-3. French. PubMed PMID : 27495519.
- LESENS O, BAUD O, HENQUELL C, LHERMET NURSE A, BEYTOUT J. Varicella outbreak in Sudanese refugees from Calais. J Travel Med. 2016. 23(5). pii : taw042. doi : 10.1093/jtm/taw042. PubMed PMID : 27378366.
- SCHUFFENECKER I, MIRAND A, JOSSET L, HENQUELL C, HECQUET D, PILORGÉ L, PETITJEAN-LECHERBONNIER J, MANOHA C, LEGOFF J, DEBACK C, PILLET S, LEPILLER Q, MANSUY JM, MARQUE-JUILLET S, ANTONA D, PEIGUE-LAFEUILLE H, LINA B. Epidemiological and clinical characteristics of patients infected with enterovirus D68, France, July to December 2014. Euro Surveill. 2016. 21(19). doi : 10.2807/1560-7917.ES.2016.21.19.30226. PubMed PMID : 27195770.
- HENQUELL C, YAMEOGO S, SANGARÉ L. First genome characterization of a novel hepatitis C virus genotype 5 variant. Infect Genet Evol. 2016. 39:173-5. doi : 10.1016/j.meegid.2016.01.016. PubMed PMID : 26807921.
- MOURGUES C, HENQUELL C, TATAR Z, PEREIRA B, NOURISSON C, TOURNADRE A, SOUBRIER M, COUDERC M. Monitoring of Epstein-Barr virus (EBV)/cytomegalovirus (CMV)/varicella-zoster virus (VZV) load in patients receiving tocilizumab for rheumatoid arthritis. Joint Bone Spine. 2016. 83(4):412-5. doi : 10.1016/j.jbspin.2015.07.009. PubMed PMID : 26725744.
- MOLET L, SALOUM K, MARQUE-JUILLET S, GARBARG-CHENON A, HENQUELL C, SCHUFFENECKER I, PEIGUE-LAFEUILLE H, ROZENBERG F, MIRAND A. Enterovirus infections in hospitals of Ile de France region over 2013. J Clin Virol. 2016. 74:37-42. doi : 10.1016/j.jcv.2015.11.024. PubMed PMID : 26655266.
- CHAPUIS A, CHABROT C, MIRAND A, POIRIER P, NOURRISSON C. Encephalitis caused by an unusual human herpes virus type 6 and Toxoplasma gondii co-infection in a cord blood transplant recipient. Int J Infect Dis. 2016. 46:79-81. doi : 10.1016/j.ijid.2016.04.002. PubMed PMID : 27060193.
- EL HOUMAMI N, MINODIER P, DUBOURG G, MIRAND A, JOUVE JL, BASMACI R, CHARREL R, BONACORSI S, YAGUPSKY P, RAOULT D, FOURNIER PE. Patterns of Kingella kingae Disease Outbreaks. Pediatr Infect Dis J. 2016. 35(3):340-6. doi : 10.1097/INF.0000000000001010. Review. PubMed PMID : 26658382.
- OTHMAN I, VOLLE R, ELARGOUBI A, GUEDICHE MN, CHAKROUN M, SFAR MT, PEREIRA B, PEIGUE-LAFEUILLE H, AOUNI M, ARCHIMBAUD C, BAILLY JL. Enterovirus meningitis in Tunisia (Monastir, Mahdia, 2011-2013) : identification of virus variants cocirculating in France. Diagn Microbiol Infect Dis. 2016. 84(2):116-22. doi : 10.1016/j.diagmicrobio.2015.10.019. PubMed PMID : 26643063.
- SEMENOVA T, LUPO J, ALAIN S, PERRIN-CONFORT G, GROSSI L, DIMIER J, EPAULARD O, MORAND P, GERMI R ; FRENCH EBV STUDY GROUP. Multicenter Evaluation of Whole-Blood Epstein-Barr Viral Load Standardization Using the WHO International Standard. J Clin Microbiol. 2016. 54(7):1746-50. doi : 10.1128/JCM.03336-15. PubMed PMID : 27076661 ; PubMed Central PMCID : PMC4922081.
2015
- HASSEL C, MIRAND A, LUKASHEV A, TERLETSKAIALADWIG E, FARKAS A, SCHUFFENECKER I, DIEDRICH S, HUEMER HP, ARCHIMBAUD C, PEIGUE-LAFEUILLE H, HENQUELL C, BAILLY JL. Transmission patterns of human enterovirus 71 to, from and among European countries, 2003 to 2013. Euro Surveill. 2015. 20(34):30005. doi : 10.2807/1560-7917.ES.2015.20.34.30005. PubMed PMID : 26530407.
- POELMAN R, SCHUFFENECKER I, VAN LEER-BUTER C, JOSSET L, NIESTERS HG, LINA B ; ESCV-ECDC EV-D68 STUDY GROUP. European surveillance for enterovirus D68 during the emerging North-American outbreak in 2014. J Clin Virol. 2015. 71:1-9. doi : 10.1016/j.jcv.2015.07.296. PubMed PMID : 26364237.
- MIRAND A, MOLET L, HASSEL C, PEIGUE-LAFEUILLE HC, ROZENBERG F, BAILLY JL, HENQUELL C. Enterovirus A71 subgenotype B5, France, 2013. Emerg Infect Dis. 2015. 21(4):707-9. doi : 10.3201/eid2104.141093. PubMed PMID : 25811300 ; PubMed Central PMCID : PMC4378463.
- VOLLE R, ARCHIMBAUD C, COURAUD PO, ROMERO IA, WEKSLER B, MIRAND A, PEREIRA B, HENQUELL C, PEIGUE-LAFEUILLE H, BAILLY JL. Differential permissivity of human cerebrovascular endothelial cells to enterovirus infection and specificities of serotype EV-A71 in crossing an in vitro model of the human blood-brain barrier. J Gen Virol. 2015. 96(Pt 7):1682-95. doi : 10.1099/vir.0.000103. PubMed PMID : 25711966.
- BREBION A, MIRAND A, REGAGNON C, ARCHIMBAUD C, CHAMBON M, PEIGUE-LAFEUILLE H, HENQUELL C. Evaluation of real-time RT-PCR Rhino&EV/Cc r-gene(®) (bioMérieux) kit versions 1 and 2 for rhinovirus detection. J Clin Virol. 2015. 62:110-3. doi : 10.1016/j.jcv.2014.10.019. PubMed PMID : 25434700.
- OTHMAN I, MIRAND A, SLAMA I, MASTOURI M, PEIGUE-LAFEUILLE H, AOUNI M, BAILLY JL. Enterovirus Migration Patterns between France and Tunisia. PLoS One. 2015. 10(12):e0145674. doi : 10.1371/journal.pone.0145674. PubMed PMID : 26709514 ; PubMed Central PMCID : PMC4692522.
- EL HOUMAMI N, MIRAND A, DUBOURG G, HUNG D, MINODIER P, JOUVE JL, CHARREL R, RAOULT D, FOURNIER PE. Hand, foot and mouth disease and Kingella kingae infections. Pediatr Infect Dis J. 2015. 34(5):547-8. doi:10.1097/INF.0000000000000607. PubMed PMID : 25876094.
- MIRAND A, PEIGUE-LAFEUILLE H. Acute flaccid myelitis and enteroviruses : an ongoing story. Lancet. 2015. 385(9978):1601-2. doi : 10.1016/S0140-6736(15)60121-0. PubMed PMID : 25638661.
- SOLIS M, MEDDEB M, SUEUR C, DOMINGO-CALAP P, SOULIER E, CHABAUD A, PERRIN P, MOULIN B, BAHRAM S, STOLL-KELLER F, CAILLARD S, BARTH H, FAFI-KREMER S ; FRENCH BKV STUDY GROUP. Sequence Variation in Amplification Target Genes and Standards Influences Interlaboratory Comparison of BK Virus DNA Load Measurement. J Clin Microbiol. 2015. 53(12):3842-52. doi : 10.1128/JCM.02145-15. PubMed PMID : 26468499 ; PubMed Central PMCID : PMC4652096.
- LE GUILLOU-GUILLEMETTE H, DUCANCELLE A, BERTRAIS S, LEMAIRE C, PIVERT A, VEILLON P, BOUTHRY E, ALAIN S, THIBAULT V, ABRAVANEL F, ROSENBERG AR, HENQUELL C, ANDRÉ-GARNIER E, PETSARIS O, VALLET S, BOUR JB, BAAZIA Y, TRIMOULET P, ANDRÉ P, GAUDY-GRAFFIN C, BETTINGER D, LARRAT S, SIGNORI-SCHMUCK A, SAOUDIN H, POZZETTO B, LAGATHU G, MINJOLLE-CHA S, STOLL-KELLER F, PAWLOTSKY JM, IZOPET J, PAYAN C, LUNEL-FABIANI F. Identification of a duplicated V3 domain in NS5A associated with cirrhosis and hepatocellular carcinoma in HCV-1b patients. J Clin Virol. 2015. 69:203-9. doi : 10.1016/j.jcv.2015.06.096. PubMed PMID : 26209408.
- RODRIGUEZ C, SOULIÉ C, MARCELIN AG, CALVEZ V, DESCAMPS D, CHARPENTIER C, FLANDRE P, RECORDON-PINSON P, BELLECAVE P, PAWLOTSKY JM, MASQUELIER B ; ANRS AC11 STUDY GROUP. HIV-1 Coreceptor Usage Assessment by Ultra-Deep Pyrosequencing and Response to Maraviroc. PLoS One. 2015. 10(6):e0127816. doi : 10.1371/journal.pone.0127816. PubMed PMID : 26068869 ; PubMed Central PMCID : PMC4466260.
- LARRAT S, VALLET S, DAVID-TCHOUDA S, CAPOROSSI A, MARGIER J, RAMIÈRE C, SCHOLTES C, HAÏM-BOUKOBZA S, ROQUE-AFONSO AM, BESSE B, ANDRÉ-GARNIER E, MOHAMED S, HALFON P, PIVERT A, LEGUILLOU-GUILLEMETTE H, ABRAVANEL F, GUIVARCH M, MACKIEWICZ V, LADA O, MOUREZ T, PLANTIER JC, BAAZIA Y, ALAIN S, HANTZ S, THIBAULT V, GAUDY-GRAFFIN C, BOUVET D, MIRAND A, HENQUELL C, GOZLAN J, LAGATHU G, PRONIER C, VELAY A, SCHVOERER E, TRIMOULET P, FLEURY H, BOUVIER-ALIAS M, BROCHOT E, DUVERLIE G, MAYLIN S, GOURIOU S, PAWLOTSKY JM, MORAND P. Naturally Occurring Resistance-Associated Variants of Hepatitis C Virus Protease Inhibitors in Poor Responders to Pegylated Interferon-Ribavirin. J Clin Microbiol. 2015. 53(7):2195-202. doi : 10.1128/JCM.03633-14. PubMed PMID : 25926499 ; PubMed Central PMCID : PMC4473242.
- FRANGE P, ASSOUMOU L, DESCAMPS D, CHÉRET A, GOUJARD C, TRAN L, GOUSSET M, AVETTAND-FENOËL V, BOCKET L, FAFI-KREMER S, GUINARD J, MORAND-JOUBERT L, NICOT F, PLANTIER JC, ROGEZ S, WIRDEN M, ROUZIOUX C, MEYER L, CHAIX ML ; FRENCH ANRS CO 6 PRIMO COHORT, THE ANRS 147 OPTIPRIM CLINICAL TRIAL AND THE AC11 RESISTANCE STUDY GROUPS ; FRENCH ANRS CO 6 PRIMO COHORT THE ANRS 147 OPTIPRIM CLINICAL TRIAL AND THE AC11 RESISTANCE STUDY GROUPS. HIV-1 subtype B-infected MSM may have driven the spread of transmitted resistant strains in France in 2007-12 : impact on susceptibility to first-line strategies. J Antimicrob Chemother. 2015. 70(7):2084-9. doi : 10.1093/jac/dkv049. PubMed PMID : 25885327.
- FOURATI S, CHARPENTIER C, AMIEL C, MORAND-JOUBERT L, REIGADAS S, TRABAUD MA, DELAUGERRE C, NICOT F, RODALLEC A, MAILLARD A, MIRAND A, JEULIN H, MONTÈS B, BARIN F, BETTINGER D, LE GUILLOU-GUILLEMETTE H, VALLET S, SIGNORI-SCHMUCK A, DESCAMPS D, CALVEZ V, FLANDRE P, MARCELIN AG ; ANRS AC11 RESISTANCE STUDY GROUP. Cross-resistance to elvitegravir and dolutegravir in 502 patients failing on raltegravir : a French national study of raltegravir-experienced HIV-1-infected patients. J Antimicrob Chemother. 2015. 70(5):1507-12. doi : 10.1093/jac/dku535. PubMed PMID : 25558077.
- CUZIN L, PUGLIESE P, SAUNÉ K, ALLAVENA C, GHOSN J, COTTALORDA J, RODALLEC A, CHAIX ML, FAFI-KREMER S, SOULIÉ C, OUKA M, CHARPENTIER C, BOCKET L, MIRAND A, GUIGUET M ; DAT’AIDS STUDY GROUP. Levels of intracellular HIV-DNA in patients with suppressive antiretroviral therapy. AIDS. 2015. 29(13):1665-71. doi:10.1097/QAD.0000000000000723. PubMed PMID : 26372277.
- SOULIE C, DESCAMPS D, GRUDÉ M, SCHNEIDER V, TRABAUD MA, MORAND-JOUBERT L, DELAUGERRE C, MONTES B, BARIN F, FERRE V, RAYMOND S, JEULIN H, ALLOUI C, YERLY S, PALLIER C, REIGADAS S, SIGNORI-SCHMUCK A, GUIGON A, FAFI-KREMER S, HAÏM-BOUKOBZA S, MIRAND A, MAILLARD A, VALLET S, ROUSSEL C, ASSOUMOU L, CALVEZ V, FLANDRE P, MARCELIN AG ; ANRS RESISTANCE AC11 GROUP. Antiretroviral-naive and -treated HIV-1 patients can harbour more resistant viruses in CSF than in plasma. J Antimicrob Chemother. 2015. 70(2):566-72. doi : 10.1093/jac/dku419. PubMed PMID : 25344810.